STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRA2ATransformer 2 alpha homolog. (277 aa)    
Predicted Functional Partners:
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.960
ENSPCLP00000005862
annotation not available
   
 0.945
SRSF10
Serine and arginine rich splicing factor 10.
   
0.919
ENSPCLP00000002049
annotation not available
   
 0.897
ENSPCLP00000002051
annotation not available
   
 0.897
ENSPCLP00000012929
annotation not available
  
0.884
SRSF4
Serine and arginine rich splicing factor 4.
   
 0.881
TRA2B
Transformer 2 beta homolog.
  
 
0.860
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.781
SRSF6
Serine and arginine rich splicing factor 6.
  
0.781
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.