Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VGLL1Vestigial like family member 1. (242 aa)    
Predicted Functional Partners:
TEAD4
TEA domain transcription factor 4.
    
 
 0.684
TEAD3
TEA domain transcription factor 3.
    
 
 0.684
TEAD1
TEA domain transcription factor 1.
    
 
 0.684
ENSPCLP00000000933
annotation not available
      
 0.615
EGLN3
Egl-9 family hypoxia inducible factor 3.
      
 0.615
ENSPCLP00000016345
annotation not available
      
 0.615
ENSPCLP00000007898
annotation not available
      
 0.614
FLT1
Fms related tyrosine kinase 1.
      
 0.614
VGLL4
Vestigial like family member 4.
      
 0.556
GATA2
GATA binding protein 2.
      
 0.506
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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