STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM1ALysine demethylase 1A. (826 aa)    
Predicted Functional Partners:
RCOR1
REST corepressor 1.
    
 0.999
HMG20B
High mobility group 20B.
   
 0.996
PHF21A
PHD finger protein 21A.
    
 0.993
RCOR3
REST corepressor 3.
    
 0.979
TP53BP1
Tumor protein p53 binding protein 1.
   
 0.942
GLYR1
Glyoxylate reductase 1 homolog.
    
 
 0.929
MSH6
mutS homolog 6.
   
  0.928
MSH3
mutS homolog 3.
   
  0.927
MSH2
mutS homolog 2.
   
  0.924
ATM
ATM serine/threonine kinase.
     
 0.920
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.