Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F13BCoagulation factor XIII B chain. (626 aa)    
Predicted Functional Partners:
ENSPCLP00000008307
annotation not available
   
 0.978
SERPIND1
Serpin family D member 1.
   
 
 0.925
FGG
Fibrinogen gamma chain.
   
 0.921
FGA
Fibrinogen alpha chain.
   
 0.912
ENSPCLP00000012382
annotation not available
   
 0.905
F13A1
Coagulation factor XIII A chain.
    
 0.892
TGM4
Transglutaminase 4.
    
 0.892
ENSPCLP00000018745
annotation not available
    
 0.892
HGD
Homogentisate 1,2-dioxygenase.
   
    0.869
ENSPCLP00000022202
annotation not available
   
 0.827
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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