STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRLSarcalumenin. (472 aa)    
Predicted Functional Partners:
WDFY4
WDFY family member 4.
     
 0.820
RBSN
Rabenosyn, RAB effector.
    
 0.729
MYL1
Myosin light chain 1.
   
  
 0.681
RNH1
Ribonuclease/angiogenin inhibitor 1.
      
 0.637
CASQ2
Calsequestrin 2.
   
 
 0.598
JPH1
Junctophilin 1.
   
  
 0.582
EIF3L
Eukaryotic translation initiation factor 3 subunit L.
    
 
 0.578
MICALL1
MICAL like 1.
    
 
 0.578
SYNC
Syncoilin, intermediate filament protein.
   
 
 0.577
SYPL2
Synaptophysin like 2.
   
  
 0.576
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.