STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBCCD1TBCC domain containing 1. (555 aa)    
Predicted Functional Partners:
SHQ1
SHQ1, H/ACA ribonucleoprotein assembly factor.
   
    0.609
CEP76
Centrosomal protein 76.
   
  
 0.585
WDR86
WD repeat domain 86.
      
 0.567
HOOK2
Hook microtubule tethering protein 2.
      
 0.565
CEP19
Centrosomal protein 19.
      
 0.562
MCPH1
Microcephalin 1.
      
 0.553
STIL
STIL centriolar assembly protein.
      
 0.546
ENSPCLP00000009519
annotation not available
    
   0.534
PPP2R3C
Protein phosphatase 2 regulatory subunit B''gamma.
    
   0.534
PPP2R3A
Protein phosphatase 2 regulatory subunit B''alpha.
    
   0.534
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.