STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRD8Bromodomain containing 8. (969 aa)    
Predicted Functional Partners:
MRGBP
MRG domain binding protein.
    
 0.989
VPS72
Vacuolar protein sorting 72 homolog.
    
 0.988
YEATS4
YEATS domain containing 4.
    
 0.987
MEAF6
MYST/Esa1 associated factor 6.
    
 0.986
TRRAP
Transformation/transcription domain associated protein.
    
 0.986
RUVBL1
RuvB like AAA ATPase 1.
    
 0.984
ENSPCLP00000006507
annotation not available
    
 0.983
ING3
Inhibitor of growth family member 3.
    
 0.982
KAT7
Lysine acetyltransferase 7.
    
 0.980
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 0.978
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.