STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF5Yip1 domain family member 5. (254 aa)    
Predicted Functional Partners:
ENSPCLP00000014864
annotation not available
   
 
 0.884
DERL1
Derlin 1.
   
 0.872
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
    
 
 0.805
EIF2B1
Eukaryotic translation initiation factor 2B subunit alpha.
      
 0.760
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 
 0.738
RNF139
Ring finger protein 139.
    
  0.704
RAB1A
RAB1A, member RAS oncogene family.
   
 
 0.700
APOB
Apolipoprotein B.
    
  0.694
ENSPCLP00000013599
annotation not available
    
  0.680
YIPF1
Yip1 domain family member 1.
    
 
 0.664
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.