STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTOFOtoferlin. (1988 aa)    
Predicted Functional Partners:
SLC17A8
Solute carrier family 17 member 8.
     
 0.798
CTBP2
C-terminal binding protein 2.
     
 0.649
POU4F3
POU class 4 homeobox 3.
   
  
 0.580
ENSPCLP00000007833
annotation not available
   
  
 0.569
ENSPCLP00000015540
annotation not available
      
 0.569
TMC1
Transmembrane channel like 1.
      
 0.569
TMPRSS3
Transmembrane serine protease 3.
      
 0.567
MYO7A
Myosin VIIA.
      
 0.567
PCDH15
Protocadherin related 15.
      
 0.567
MYO6
Myosin VI.
      
 0.567
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.