STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPL2BSignal peptide peptidase like 2B. (596 aa)    
Predicted Functional Partners:
FAM78B
Family with sequence similarity 78 member B.
      
 0.766
CIAO2B
Cytosolic iron-sulfur assembly component 2B.
      
 0.763
PLEKHM3
Pleckstrin homology domain containing M3.
      
 0.682
ENSPCLP00000011615
annotation not available
   
    0.651
ENSPCLP00000003093
annotation not available
    
 
 0.604
ENSPCLP00000011865
annotation not available
    
 
 0.571
LRRCC1
Leucine rich repeat and coiled-coil centrosomal protein 1.
      
 0.567
SPATA5
Spermatogenesis associated 5.
      
 0.565
THYN1
Thymocyte nuclear protein 1.
      
 0.562
RALYL
RALY RNA binding protein like.
      
 0.548
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.