STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCC4ATP binding cassette subfamily C member 4. (1526 aa)    
Predicted Functional Partners:
SNX27
Sorting nexin 27.
    
 
 0.624
ATP11A
ATPase phospholipid transporting 11A.
   
 0.598
GPR180
G protein-coupled receptor 180.
      
 0.569
TMEM17
Transmembrane protein 17.
      
 0.566
LDB2
LIM domain binding 2.
      
 0.563
ENSPCLP00000011745
annotation not available
   
 0.551
KATNAL2
Katanin catalytic subunit A1 like 2.
   
 0.542
ENSPCLP00000016995
annotation not available
    
 0.524
ENSPCLP00000017465
annotation not available
   
 
  0.520
NME8
NME/NM23 family member 8.
  
 0.511
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.