STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLSTN3Calsyntenin 3. (1023 aa)    
Predicted Functional Partners:
LRRTM1
Leucine rich repeat transmembrane neuronal 1.
   
  
 0.585
PEX5
Peroxisomal biogenesis factor 5.
   
  
 0.584
MDGA1
MAM domain containing glycosylphosphatidylinositol anchor 1.
      
 0.565
GNB3
G protein subunit beta 3.
      
 0.554
ERP27
Endoplasmic reticulum protein 27.
      
 0.553
TELO2
Telomere maintenance 2.
      
 0.546
COPS7A
COP9 signalosome subunit 7A.
      
 0.545
FKBP9
FKBP prolyl isomerase 9.
      
 0.485
SH3BP5
SH3 domain binding protein 5.
      
 0.480
SNCAIP
Synuclein alpha interacting protein.
      
 0.476
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.