STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTP4A1Protein tyrosine phosphatase 4A1. (173 aa)    
Predicted Functional Partners:
CSNK1A1
Casein kinase 1 alpha 1.
   
    0.881
LSM14A
LSM14A mRNA processing body assembly factor.
   
    0.848
TAF12
TATA-box binding protein associated factor 12.
     
 0.736
ENY2
ENY2 transcription and export complex 2 subunit.
   
 
  0.679
RABGGTB
Rab geranylgeranyltransferase subunit beta.
    
  0.665
FAM13B
Family with sequence similarity 13 member B.
      
 0.546
RCBTB1
RCC1 and BTB domain containing protein 1.
      
 0.546
TMEM184C
Transmembrane protein 184C.
      
 0.544
CNNM2
Cyclin and CBS domain divalent metal cation transport mediator 2.
    
 
 0.527
ENSPCLP00000012741
annotation not available
   
    0.527
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.