WDR89 protein (Phasianus colchicus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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Experiments

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[Homology]

Score

WDR89

WD repeat domain 89. (437 aa)

Predicted Functional Partners:

SDAD1

0.638

WDR43

0.633

UTP3

0.528

RPF2

0.528

NOL10

0.505

NOL8

0.470

TFB2M

0.442

DIMT1

0.442

NOC4L

0.426

DDX54

0.412

Your Current Organism:

Phasianus colchicus

NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX54	DIMT1	ENSPCLP00000006402	ENSPCLP00000018405	DEAD-box helicase 54.	DIMT1 rRNA methyltransferase and ribosome maturation factor.	0.428
DDX54	NOC4L	ENSPCLP00000006402	ENSPCLP00000006141	DEAD-box helicase 54.	Nucleolar complex associated 4 homolog.	0.795
DDX54	NOL10	ENSPCLP00000006402	ENSPCLP00000022408	DEAD-box helicase 54.	Nucleolar protein 10.	0.844
DDX54	RPF2	ENSPCLP00000006402	ENSPCLP00000017388	DEAD-box helicase 54.	Ribosome production factor 2 homolog.	0.960
DDX54	SDAD1	ENSPCLP00000006402	ENSPCLP00000012808	DEAD-box helicase 54.	SDA1 domain containing 1.	0.890
DDX54	TFB2M	ENSPCLP00000006402	ENSPCLP00000001304	DEAD-box helicase 54.	Transcription factor B2, mitochondrial.	0.420
DDX54	UTP3	ENSPCLP00000006402	ENSPCLP00000012818	DEAD-box helicase 54.	UTP3 small subunit processome component.	0.931
DDX54	WDR43	ENSPCLP00000006402	ENSPCLP00000004108	DEAD-box helicase 54.	WD repeat domain 43.	0.916
DDX54	WDR89	ENSPCLP00000006402	ENSPCLP00000021715	DEAD-box helicase 54.	WD repeat domain 89.	0.412
DIMT1	DDX54	ENSPCLP00000018405	ENSPCLP00000006402	DIMT1 rRNA methyltransferase and ribosome maturation factor.	DEAD-box helicase 54.	0.428
DIMT1	NOC4L	ENSPCLP00000018405	ENSPCLP00000006141	DIMT1 rRNA methyltransferase and ribosome maturation factor.	Nucleolar complex associated 4 homolog.	0.998
DIMT1	NOL10	ENSPCLP00000018405	ENSPCLP00000022408	DIMT1 rRNA methyltransferase and ribosome maturation factor.	Nucleolar protein 10.	0.697
DIMT1	RPF2	ENSPCLP00000018405	ENSPCLP00000017388	DIMT1 rRNA methyltransferase and ribosome maturation factor.	Ribosome production factor 2 homolog.	0.881
DIMT1	SDAD1	ENSPCLP00000018405	ENSPCLP00000012808	DIMT1 rRNA methyltransferase and ribosome maturation factor.	SDA1 domain containing 1.	0.851
DIMT1	UTP3	ENSPCLP00000018405	ENSPCLP00000012818	DIMT1 rRNA methyltransferase and ribosome maturation factor.	UTP3 small subunit processome component.	0.981
DIMT1	WDR43	ENSPCLP00000018405	ENSPCLP00000004108	DIMT1 rRNA methyltransferase and ribosome maturation factor.	WD repeat domain 43.	0.987
DIMT1	WDR89	ENSPCLP00000018405	ENSPCLP00000021715	DIMT1 rRNA methyltransferase and ribosome maturation factor.	WD repeat domain 89.	0.442
NOC4L	DDX54	ENSPCLP00000006141	ENSPCLP00000006402	Nucleolar complex associated 4 homolog.	DEAD-box helicase 54.	0.795
NOC4L	DIMT1	ENSPCLP00000006141	ENSPCLP00000018405	Nucleolar complex associated 4 homolog.	DIMT1 rRNA methyltransferase and ribosome maturation factor.	0.998
NOC4L	NOL10	ENSPCLP00000006141	ENSPCLP00000022408	Nucleolar complex associated 4 homolog.	Nucleolar protein 10.	0.999