Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDC5L | DDX5 | ENSPCLP00000021998 | ENSPCLP00000010657 | Cell division cycle 5 like. | DEAD-box helicase 5. | 0.420 |
CDC5L | PRPF40A | ENSPCLP00000021998 | ENSPCLP00000007483 | Cell division cycle 5 like. | pre-mRNA processing factor 40 homolog A. | 0.692 |
CDC5L | RBM39 | ENSPCLP00000021998 | ENSPCLP00000022004 | Cell division cycle 5 like. | RNA binding motif protein 39. | 0.968 |
CDC5L | SF3B1 | ENSPCLP00000021998 | ENSPCLP00000011340 | Cell division cycle 5 like. | Splicing factor 3b subunit 1. | 0.999 |
CDC5L | SRRM1 | ENSPCLP00000021998 | ENSPCLP00000008108 | Cell division cycle 5 like. | Serine and arginine repetitive matrix 1. | 0.894 |
CDC5L | U2AF2 | ENSPCLP00000021998 | ENSPCLP00000017621 | Cell division cycle 5 like. | U2 small nuclear RNA auxiliary factor 2. | 0.998 |
DDA1 | RBM39 | ENSPCLP00000015163 | ENSPCLP00000022004 | DET1 and DDB1 associated 1. | RNA binding motif protein 39. | 0.899 |
DDX5 | CDC5L | ENSPCLP00000010657 | ENSPCLP00000021998 | DEAD-box helicase 5. | Cell division cycle 5 like. | 0.420 |
DDX5 | LUC7L3 | ENSPCLP00000010657 | ENSPCLP00000014488 | DEAD-box helicase 5. | LUC7 like 3 pre-mRNA splicing factor. | 0.709 |
DDX5 | PRPF40A | ENSPCLP00000010657 | ENSPCLP00000007483 | DEAD-box helicase 5. | pre-mRNA processing factor 40 homolog A. | 0.669 |
DDX5 | RBM25 | ENSPCLP00000010657 | ENSPCLP00000009271 | DEAD-box helicase 5. | RNA binding motif protein 25. | 0.748 |
DDX5 | RBM39 | ENSPCLP00000010657 | ENSPCLP00000022004 | DEAD-box helicase 5. | RNA binding motif protein 39. | 0.919 |
DDX5 | SF3B1 | ENSPCLP00000010657 | ENSPCLP00000011340 | DEAD-box helicase 5. | Splicing factor 3b subunit 1. | 0.952 |
DDX5 | SON | ENSPCLP00000010657 | ENSPCLP00000023465 | DEAD-box helicase 5. | SON DNA binding protein. | 0.791 |
DDX5 | SRRM1 | ENSPCLP00000010657 | ENSPCLP00000008108 | DEAD-box helicase 5. | Serine and arginine repetitive matrix 1. | 0.650 |
DDX5 | U2AF2 | ENSPCLP00000010657 | ENSPCLP00000017621 | DEAD-box helicase 5. | U2 small nuclear RNA auxiliary factor 2. | 0.435 |
LUC7L3 | DDX5 | ENSPCLP00000014488 | ENSPCLP00000010657 | LUC7 like 3 pre-mRNA splicing factor. | DEAD-box helicase 5. | 0.709 |
LUC7L3 | PRPF40A | ENSPCLP00000014488 | ENSPCLP00000007483 | LUC7 like 3 pre-mRNA splicing factor. | pre-mRNA processing factor 40 homolog A. | 0.927 |
LUC7L3 | RBM25 | ENSPCLP00000014488 | ENSPCLP00000009271 | LUC7 like 3 pre-mRNA splicing factor. | RNA binding motif protein 25. | 0.978 |
LUC7L3 | RBM39 | ENSPCLP00000014488 | ENSPCLP00000022004 | LUC7 like 3 pre-mRNA splicing factor. | RNA binding motif protein 39. | 0.824 |
page 1 of 4