STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MUL1Mitochondrial E3 ubiquitin protein ligase 1. (384 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
    
  0.778
TMEM115
Transmembrane protein 115.
   
    0.765
USP30
Ubiquitin specific peptidase 30.
     
 0.691
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
    
 
 0.677
UBE2D2
Ubiquitin conjugating enzyme E2 D2.
    
 
 0.677
RHOT2
Ras homolog family member T2.
     
 0.648
TMEM11
Transmembrane protein 11.
   
  
 0.604
NAA35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
      
 0.567
PINK1
PTEN induced kinase 1.
    
 
 0.562
NR6A1
Nuclear receptor subfamily 6 group A member 1.
    
 
 0.549
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.