STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPRG1LTumor protein p63 regulated 1 like. (272 aa)    
Predicted Functional Partners:
ENSPCLP00000012929
annotation not available
   
 0.894
ENSPCLP00000005862
annotation not available
   
 0.874
RBM8A
RNA binding motif protein 8A.
   
 0.809
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
 0.775
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 0.736
MAGOH
Mago homolog, exon junction complex subunit.
   
 0.736
U2AF2
U2 small nuclear RNA auxiliary factor 2.
   
 0.673
SLU7
SLU7 homolog, splicing factor.
    
 0.630
NUDT21
Nudix hydrolase 21.
   
 
 0.619
ENSPCLP00000020115
annotation not available
    
 0.608
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.