STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCCSHolocytochrome c synthase. (341 aa)    
Predicted Functional Partners:
COX10
Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.
   
 
 0.971
FECH
Ferrochelatase.
     
 0.930
NDUFV2
NADH:ubiquinone oxidoreductase core subunit V2.
   
  
 0.668
MRPL35
Mitochondrial ribosomal protein L35.
   
  
 0.593
ARHGAP6
Rho GTPase activating protein 6.
      
 0.565
ENSPCLP00000005056
annotation not available
   
 
 0.535
ENSPCLP00000015545
annotation not available
   
 
 0.535
NPAT
Nuclear protein, coactivator of histone transcription.
    
 
 0.535
REXO4
REX4 homolog, 3'-5' exonuclease.
      
 0.531
UQCRFS1
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
   
  
 0.503
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.