STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPXC5Putative UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5. (128 aa)    
Predicted Functional Partners:
LPXA
Putative acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial.
 
   
 0.791
KDSB
3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial.
 
   
 0.762
KDTA
Putative 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial.
 
   
 0.759
KDSA
2-dehydro-3-deoxyphosphooctonate aldolase.
 
  
 0.742
LPXD2
Putative UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial.
  
  
 0.583
MA16_Dca016866
3R-hydroxymyristoyl ACP dehydrase.
     
 0.572
MA16_Dca020879
Uncharacterized protein.
  
  
 0.571
TATA
Sec-independent protein translocase protein TATA, chloroplastic.
  
  
 0.542
MA16_Dca008772
[acyl-carrier-protein] S-malonyltransferase.
     
 0.536
MA16_Dca025788
Uncharacterized protein.
     
 0.529
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.