STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADF4Actin-depolymerizing factor 4; Belongs to the actin-binding proteins ADF family. (83 aa)    
Predicted Functional Partners:
MA16_Dca009490
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 0.695
MA16_Dca010170
Actin.
   
 
 0.647
MA16_Dca000269
Actin.
   
 
 0.647
MA16_Dca024386
Actin.
   
 
 0.647
MA16_Dca025815
Actin.
   
 
 0.647
Mut11-19
Protein Mut11.
   
 
 0.620
MA16_Dca005248
Actin.
   
 
 0.567
BAK1
BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1.
      
 0.517
BAK1-2
BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1.
      
 0.517
FRK1-4
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
 
 0.517
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.