STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca027794Reverse transcriptase domain-containing protein. (389 aa)    
Predicted Functional Partners:
MA16_Dca026547
Ribonuclease H protein.
  
     0.509
MA16_Dca002657
Ribonuclease H protein.
  
     0.500
MA16_Dca002745
Ribonuclease H protein.
  
     0.495
MA16_Dca020672
Ribonuclease H protein.
  
     0.492
MA16_Dca012922
Ribonuclease H protein.
  
     0.489
MA16_Dca004146
Ribonuclease H protein.
  
     0.489
MA16_Dca002214
Ribonuclease H protein.
  
     0.484
MA16_Dca025712
Ribonuclease H protein.
  
     0.481
MA16_Dca003014
Ribonuclease H protein.
  
     0.477
MA16_Dca018319
Ribonuclease H protein.
  
     0.467
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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