STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BHLH47Transcription factor bHLH47. (223 aa)    
Predicted Functional Partners:
NAS4
Putative nicotianamine synthase 4.
      
 0.436
MA16_Dca023654
Uncharacterized protein.
   
  
 0.424
MA16_Dca023653
Uncharacterized protein.
   
  
 0.424
OPT3
Oligopeptide transporter 3.
   
  
 0.417
OPT3-2
Oligopeptide transporter 3.
   
  
 0.417
MA16_Dca026877
RING finger and CHY zinc finger domain-containing protein 1.
   
  
 0.415
MA16_Dca017285
RING finger and CHY zinc finger domain-containing protein 1.
   
  
 0.415
MA16_Dca019507
Ninja-family protein 8.
      
 0.412
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.