STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABA1FRas-related protein RABA1f. (215 aa)    
Predicted Functional Partners:
MA16_Dca027185
Kinesin-like calmodulin-binding protein like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.724
MA16_Dca018451
Kinesin-like calmodulin-binding protein like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.724
MA16_Dca019416
Kinesin-like calmodulin-binding protein like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.724
MA16_Dca027257
Kinesin-like calmodulin-binding protein like.
    
 0.724
MA16_Dca015410
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.655
MA16_Dca010629
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.655
PI4KBETA1
Phosphatidylinositol 4-kinase beta 1; Belongs to the PI3/PI4-kinase family.
    
 0.652
PI4KBETA1-2
Phosphatidylinositol 4-kinase beta 1.
    
 0.652
KEG
E3 ubiquitin-protein ligase KEG.
   
 0.642
SEC8
Putative exocyst complex component 4.
    
 0.593
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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