STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PYRB2Aspartate carbamoyltransferase 2, chloroplastic; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (399 aa)    
Predicted Functional Partners:
carA
Carbamoyl-phosphate synthase small chain.
 
 
 
 0.994
MCCA
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.
 
   
 0.992
MA16_Dca013524
Argininosuccinate synthase, chloroplastic.
  
 
 0.988
PYR4
Dihydroorotase, mitochondrial.
   
 
 0.980
ARGF
Ornithine carbamoyltransferase, chloroplastic; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
0.950
MA16_Dca012713
Carbamoyl-phosphate synthase large subunit.
 
   
 0.928
MA16_Dca021606
Asparagine synthetase [glutamine-hydrolyzing] 2.
    
 0.920
MA16_Dca023375
Asparagine synthetase [glutamine-hydrolyzing].
    
 0.920
MA16_Dca009135
Isoaspartyl peptidase/L-asparaginase.
    
 0.913
SDH1-1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
  
 
 0.909
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.