STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EF1Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)    
Predicted Functional Partners:
RAN3
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.938
AKN1
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
 
    
 0.902
AKN1-2
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
 
    
 0.902
AKN1-3
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
 
    
 0.902
rps6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.875
rps6-2
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.875
MA16_Dca021643
Elongation factor 1-beta 1; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.844
MA16_Dca005964
Elongation factor 1-delta.
   
 0.844
MA16_Dca001204
Elongation factor 1-delta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.844
RPL6-2
60S ribosomal protein L6.
   
 0.831
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.