STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca022610Choline-phosphate cytidylyltransferase. (298 aa)    
Predicted Functional Partners:
MA16_Dca001186
Choline/ethanolamine kinase.
     
 0.951
MA16_Dca001439
Choline/ethanolamine kinase.
     
 0.951
MA16_Dca020664
Choline/ethanolamine kinase.
     
 0.951
NMT1
Phosphoethanolamine N-methyltransferase 1.
  
 
 0.930
MA16_Dca001421
Choline-phosphate cytidylyltransferase.
  
  
 
0.901
MA16_Dca010924
Choline-phosphate cytidylyltransferase.
  
  
 
0.901
MA16_Dca024487
Ethanolaminephosphotransferase.
     
 0.665
MA16_Dca004981
Ethanolamine kinase.
     
 0.529
ALS1
Acetolactate synthase.
  
 
 0.497
HACL
2-hydroxyacyl-CoA lyase.
  
 
 0.497
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.