STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAUT7Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (648 aa)    
Predicted Functional Partners:
CYN
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.911
ULP1B
Ubiquitin-like-specific protease 1B.
   
 0.811
MA16_Dca015108
Signal peptidase I.
   
 0.811
UGPA-2
UTP--glucose-1-phosphate uridylyltransferase.
     
  0.800
MA16_Dca024450
Uncharacterized protein.
     
  0.800
WAXY-2
Granule-bound starch synthase 1, chloroplastic/amyloplastic.
     
  0.800
GAE1
UDP-glucuronate 4-epimerase 1.
     
  0.650
GAE1-2
UDP-glucuronate 4-epimerase 1.
     
  0.650
GAE3
UDP-glucuronate 4-epimerase 3.
     
  0.650
GAE6
UDP-glucuronate 4-epimerase 6.
     
  0.650
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.