STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca023993Suf domain-containing protein. (601 aa)    
Predicted Functional Partners:
Mut11-12
Protein Mut11.
    
 0.994
MA16_Dca011011
Zinc finger CCCH domain-containing protein 45.
   
 0.992
CPSF30-8
Cleavage and polyadenylation specificity factor CPSF30.
   
 0.992
MA16_Dca021842
Fip1 domain-containing protein.
   
 0.989
FY-2
Flowering time control protein FY.
   
 0.987
MA16_Dca010440
Fip1 domain-containing protein.
   
 0.975
MA16_Dca021544
Uncharacterized protein.
    
 0.974
MA16_Dca008660
28 kDa ribonucleoprotein, chloroplastic.
   
 0.974
MA16_Dca010811
CSTF2_hinge domain-containing protein.
   
 0.974
MA16_Dca019711
Uncharacterized protein.
    
 0.972
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.