STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca024905Uncharacterized protein. (195 aa)    
Predicted Functional Partners:
MA16_Dca012361
Pre-mRNA-splicing factor SLU7.
   
 0.898
MA16_Dca012419
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase.
    
 0.888
MA16_Dca012546
MI domain-containing protein.
   
 0.866
MA16_Dca004997
Cir_N domain-containing protein.
   
 0.864
PUB49
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.863
MA16_Dca017912
Cwf21 domain-containing protein.
    
 0.839
Mut11-6
Protein Mut11.
    
 0.819
Mut11-17
Protein Mut11.
    
 0.819
MA16_Dca026132
Uncharacterized protein.
   
 
 0.813
MA16_Dca025333
Uncharacterized protein.
   
 0.811
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.