STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca019293Polynucleotide 5'-hydroxyl-kinase NOL9. (382 aa)    
Predicted Functional Partners:
MA16_Dca004586
Uncharacterized protein.
   
 0.963
MA16_Dca012423
Uncharacterized protein.
   
 0.922
RACK1B-2
Guanine nucleotide-binding protein subunit beta-like protein B.
   
 0.922
MA16_Dca020536
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 
 0.799
MA16_Dca010315
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 0.757
MA16_Dca003958
U3snoRNP10 domain-containing protein.
   
 
  0.674
MA16_Dca017082
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
  0.669
MA16_Dca019813
Putative rRNA-processing protein EBP2 like.
   
 
 0.656
MA16_Dca011412
G domain-containing protein.
   
 
 0.613
MA16_Dca012319
CP-type G domain-containing protein.
   
 
 0.613
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.