STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca018436Putative mitochondrial protein. (270 aa)    
Predicted Functional Partners:
MA16_Dca015769
Ribonuclease H protein.
  
     0.483
MA16_Dca009944
Ribonuclease H protein.
  
     0.470
MA16_Dca019373
Integrator complex subunit 11.
  
     0.460
MA16_Dca019771
Ribonuclease H protein.
  
     0.451
MA16_Dca010413
Ribonuclease H protein.
  
     0.447
MA16_Dca002064
Integrator complex subunit 11.
  
     0.437
MA16_Dca013501
Ribonuclease H protein.
  
     0.436
MA16_Dca008837
Integrator complex subunit 11.
  
     0.435
MA16_Dca006934
Integrator complex subunit 11.
  
     0.435
MA16_Dca013843
Ribonuclease H protein.
  
     0.433
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.