STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUL3ACullin-3A; Belongs to the cullin family. (734 aa)    
Predicted Functional Partners:
RBX1A
RING-box protein 1a.
    
 0.948
PRT1
E3 ubiquitin-protein ligase PRT1.
    
 0.947
PRT1-3
E3 ubiquitin-protein ligase PRT1.
    
 0.947
PRT1-4
E3 ubiquitin-protein ligase PRT1.
    
 0.947
CAND1
Cullin-associated NEDD8-dissociated protein 1.
   
 0.946
RCE1
NEDD8-conjugating enzyme Ubc12; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.915
UBC7
Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.909
CSN5A
COP9 signalosome complex subunit 5a.
    
 0.908
CUL3A-2
Cullin-3A; Belongs to the cullin family.
  
  
 
0.901
SKIP32
F-box protein 7.
    
 0.882
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.