STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAF2CRS2-associated factor 2, chloroplastic. (433 aa)    
Predicted Functional Partners:
MA16_Dca011146
RNase III domain-containing protein.
    
 
 0.556
MA16_Dca014420
Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic.
 
    
 0.538
MA16_Dca002600
Uncharacterized protein.
   
  
 0.522
MA16_Dca001002
Beta-Casp domain-containing protein.
    
 0.515
MA16_Dca001132
Pentatricopeptide repeat-containing protein.
      
 0.502
CRS2
Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic; Belongs to the PTH family.
   
 
 0.498
CPSF73-II-2
Cleavage and polyadenylation specificity factor subunit 3-II.
    
 0.495
MA16_Dca008750
Uncharacterized protein.
    
 0.491
MA16_Dca002869
Uncharacterized protein.
    
 0.490
MA16_Dca003634
Uncharacterized protein.
    
 0.487
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.