STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSNAP-2Gamma-soluble NSF attachment protein. (155 aa)    
Predicted Functional Partners:
MA16_Dca020292
Alpha-soluble NSF attachment protein.
   
 0.908
NSF
Vesicle-fusing ATPase.
   
 0.826
NSF-2
Vesicle-fusing ATPase.
   
 0.826
NSF-3
Vesicle-fusing ATPase.
   
 0.826
SYP41
Syntaxin-41; Belongs to the syntaxin family.
    
 0.798
GOS12
Golgi SNAP receptor complex member 1-2.
   
 0.782
SYP52
Syntaxin-52; Belongs to the syntaxin family.
    
 0.777
SYP61-3
Syntaxin-61.
    
 0.777
VTI13
Vesicle transport v-SNARE 13.
   
 0.742
VTI13-2
Vesicle transport v-SNARE 13.
   
 0.742
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.