STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR1(+)-neomenthol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (315 aa)    
Predicted Functional Partners:
MA16_Dca016596
Microsomal prostaglandin-E synthase 2.
     
 0.902
MA16_Dca009707
Microsomal prostaglandin-E synthase 2.
     
 0.902
GDCSP
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
    
 0.593
PSY
Phytoene synthase, chloroplastic.
   
  
 0.563
PSY-2
Phytoene synthase, chloroplastic.
   
  
 0.563
CLPB3
Chaperone protein ClpB3, chloroplastic.
   
  
 0.523
CLPB3-2
Chaperone protein ClpB3, mitochondrial.
   
  
 0.523
CLPB3-3
Chaperone protein ClpB3, chloroplastic.
   
  
 0.523
CLPB3-4
Chaperone protein ClpB3, chloroplastic.
   
  
 0.523
CLPB3-5
Chaperone protein ClpB3, mitochondrial; Belongs to the ClpA/ClpB family.
   
  
 0.523
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.