STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca022375Sister chromatid cohesion protein. (1786 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes protein 3.
   
 0.979
SMC3-2
Structural maintenance of chromosomes protein 3.
   
 0.979
SMC1
Structural maintenance of chromosomes protein 1.
   
 0.952
MA16_Dca000318
DUF641 domain-containing protein.
   
 0.952
SMC1-2
Structural maintenance of chromosomes protein.
   
 0.952
SYN3
Sister chromatid cohesion 1 protein 3.
  
 0.931
MA16_Dca022188
Uncharacterized protein.
    
 0.928
MA16_Dca022192
Uncharacterized protein.
    
 0.928
SYN2
Sister chromatid cohesion 1 protein 2.
   
 0.917
SYN1
Sister chromatid cohesion 1 protein 1.
   
 0.917
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.