STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca016396Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family. (73 aa)    
Predicted Functional Partners:
AMY3
Alpha-amylase.
  
 
 0.783
MA16_Dca005651
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
 0.764
MA16_Dca000314
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
 0.762
AMY2-2
Alpha-amylase.
  
 
 0.756
AMY2
Putative alpha-amylase 2.
  
 
 0.755
DPE1
4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic.
    
 0.735
DPE1-2
4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic.
    
 0.735
DPE2
4-alpha-glucanotransferase DPE2.
    
 0.730
MA16_Dca018929
Uncharacterized protein.
   
 0.706
MA16_Dca000842
PRKCSH-like domain-containing protein.
   
 0.706
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.