STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTL1TPR repeat-containing thioredoxin TTL1. (661 aa)    
Predicted Functional Partners:
SYD
Chromatin structure-remodeling complex protein SYD.
    
 0.817
SYD-3
Chromatin structure-remodeling complex protein SYD.
    
 0.817
SAP7
Zinc finger A20 and AN1 domain-containing stress-associated protein 7.
   
 0.803
BAS1
2-Cys peroxiredoxin BAS1, chloroplastic.
  
 0.762
BAS1-2
2-Cys peroxiredoxin BAS1, chloroplastic.
  
 0.762
MA16_Dca010396
Endoplasmin.
  
 0.745
HSP70-17
Heat shock 70 kDa protein 17.
  
 0.744
MA16_Dca021212
Uncharacterized protein.
    
 0.737
HSP81-3
Heat shock protein 81-3.
  
 0.712
HSP90-4
Heat shock protein 90-4.
  
 0.712
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.