Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C1-2 | MYB44-13 | A0A2I0VW85 | A0A2I0X703 | Anthocyanin regulatory C1 protein. | Transcription factor MYB44. | 0.474 |
C1-2 | TT8 | A0A2I0VW85 | A0A2I0VRP4 | Anthocyanin regulatory C1 protein. | Transcription factor TT8. | 0.488 |
C1-2 | TTG1 | A0A2I0VW85 | A0A2I0WM41 | Anthocyanin regulatory C1 protein. | Protein TRANSPARENT TESTA GLABRA 1. | 0.400 |
MYB44-13 | C1-2 | A0A2I0X703 | A0A2I0VW85 | Transcription factor MYB44. | Anthocyanin regulatory C1 protein. | 0.474 |
TT8 | C1-2 | A0A2I0VRP4 | A0A2I0VW85 | Transcription factor TT8. | Anthocyanin regulatory C1 protein. | 0.488 |
TT8 | TTG1 | A0A2I0VRP4 | A0A2I0WM41 | Transcription factor TT8. | Protein TRANSPARENT TESTA GLABRA 1. | 0.658 |
TTG1 | C1-2 | A0A2I0WM41 | A0A2I0VW85 | Protein TRANSPARENT TESTA GLABRA 1. | Anthocyanin regulatory C1 protein. | 0.400 |
TTG1 | TT8 | A0A2I0WM41 | A0A2I0VRP4 | Protein TRANSPARENT TESTA GLABRA 1. | Transcription factor TT8. | 0.658 |