STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR12Cytochrome b561 and DOMON domain-containing protein. (393 aa)    
Predicted Functional Partners:
rpl23
50S ribosomal protein L23, chloroplastic.
   
 
 0.654
MA16_Dca010610
Uncharacterized protein.
   
   0.636
RPL3B
50S ribosomal protein L3-2, chloroplastic; Belongs to the universal ribosomal protein uL3 family.
   
   0.596
RPL3A
50S ribosomal protein L3-1, chloroplastic; Belongs to the universal ribosomal protein uL3 family.
   
   0.596
MA16_Dca014565
Uncharacterized protein.
   
 
 0.582
MA16_Dca018994
Uncharacterized protein.
   
 
 0.567
RPL13
50S ribosomal protein L13, chloroplastic; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.566
rps5-2
30S ribosomal protein S5, chloroplastic; Belongs to the universal ribosomal protein uS5 family.
   
   0.560
RPL28
50S ribosomal protein L28, chloroplastic.
   
 
 0.557
rps16
30S ribosomal protein S16, chloroplastic.
   
 
 0.556
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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