STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODO1Protein ODORANT1. (203 aa)    
Predicted Functional Partners:
HY5
Transcription factor HY5.
    
 
 0.535
SPS1-2
Solanesyl-diphosphate synthase 1, mitochondrial; Belongs to the FPP/GGPP synthase family.
      
 0.513
SPS1-3
Solanesyl-diphosphate synthase 1, mitochondrial; Belongs to the FPP/GGPP synthase family.
      
 0.513
IPI1
Isopentenyl-diphosphate Delta-isomerase I.
      
 0.510
IPI1-2
Isopentenyl-diphosphate Delta-isomerase I.
      
 0.510
MYB98-2
Transcription factor MYB98.
  
     0.509
MYB98-3
Transcription factor MYB98.
  
     0.508
MYB98-5
Transcription factor MYB98.
  
     0.508
MYB98
Transcription factor MYB98.
  
     0.503
MYB44-13
Transcription factor MYB44.
  
     0.483
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.