STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BGLU1Beta-glucosidase 1; Belongs to the glycosyl hydrolase 1 family. (254 aa)    
Predicted Functional Partners:
CAT2-4
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
     
 0.640
GME-2
GDP-mannose 3,5-epimerase 2.
      
 0.637
MA16_Dca026985
Alcohol dehydrogenase class-3.
      
 0.637
MA16_Dca011066
Methyltransferase.
      
 0.636
MA16_Dca010464
Methyltransferase.
      
 0.636
GSTZ5-2
Protein IN2-1 like B; Belongs to the GST superfamily.
      
 0.635
DRT102
DNA-damage-repair/toleration protein DRT102.
  
 
 0.617
METK5
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
      
 0.514
SAM1
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
      
 0.514
SAMS
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
      
 0.513
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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