STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UPF2Regulator of nonsense transcripts UPF2. (400 aa)    
Predicted Functional Partners:
UPF3
Regulator of nonsense transcripts UPF3.
   
 0.999
UPF1-3
Regulator of nonsense transcripts 1 like.
   
 0.997
UPF1-6
Regulator of nonsense transcripts 1 like.
   
 0.997
PAB2-6
Polyadenylate-binding protein 2.
    
 0.995
MA16_Dca013605
PWI domain-containing protein.
    
 
 0.964
MA16_Dca004227
Nucleolin 2.
    
 0.893
MA16_Dca005891
Putative polyadenylate-binding protein.
    
 0.893
MA16_Dca003419
Putative polyadenylate-binding protein.
    
 0.893
MA16_Dca023187
Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.
   
 
 0.819
MA16_Dca020371
Protein mago nashi like.
     
 0.800
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.