STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPOX1Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (450 aa)    
Predicted Functional Partners:
HEMH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
 
 0.917
MA16_Dca021888
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
 
 0.904
HEMH-2
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
 
 0.896
MA16_Dca004832
Uroporphyrinogen decarboxylase 2, chloroplastic.
 
 
 0.884
MA16_Dca020854
Uroporphyrinogen decarboxylase 2, chloroplastic.
 
 
 0.878
CPX
Coproporphyrinogen-III oxidase, chloroplastic.
  
 
 0.834
CHLH
Magnesium-chelatase subunit ChlH, chloroplastic.
     
 0.792
CHLI
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.
   
 
 0.778
CHLD
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.
   
 
 0.673
MA16_Dca015441
Uncharacterized protein.
   
 
 0.658
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.