STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca024955Putative mitochondrial-processing peptidase subunit beta. (201 aa)    
Predicted Functional Partners:
CYCL
Cytochrome c1-1, heme protein, mitochondrial.
   
 0.972
MA16_Dca017415
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 0.950
MA16_Dca005283
Cytochrome b-c1 complex subunit 9.
   
 0.942
COX5B-2
Cytochrome c oxidase subunit 5b-2, mitochondrial.
   
 0.939
MA16_Dca014147
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial.
   
 0.938
MA16_Dca007934
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial; Belongs to the complex I 75 kDa subunit family.
   
 0.928
MA16_Dca019756
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
  
 
 0.919
MA16_Dca012205
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial.
   
 0.916
NAD7
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2.
   
 0.912
COX6A
Cytochrome c oxidase subunit 6a, mitochondrial; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.911
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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