STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAO4Putative polyamine oxidase 4. (459 aa)    
Predicted Functional Partners:
PSY
Phytoene synthase, chloroplastic.
  
 
 0.748
SQS1
Squalene synthase.
  
 
 0.748
MA16_Dca006339
Uncharacterized protein.
  
 
 0.748
PSY-2
Phytoene synthase, chloroplastic.
  
 
 0.748
CHLP
Geranylgeranyl diphosphate reductase, chloroplastic.
  
 
 0.698
CHLP-2
Geranylgeranyl diphosphate reductase, chloroplastic.
  
 
 0.698
CHLI
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.
  
  
 0.562
CHLH
Magnesium-chelatase subunit ChlH, chloroplastic.
  
  
 0.560
SDP6
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.544
TSPO
Translocator protein like.
  
  
 0.429
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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