STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca002442Uncharacterized protein. (156 aa)    
Predicted Functional Partners:
XBOS33-2
Putative E3 ubiquitin-protein ligase XBOS33.
    
 0.837
MA16_Dca013359
Anaphase-promoting complex subunit 10.
    
 0.747
P5CS
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
      
 0.593
MA16_Dca001162
Gluconokinase; Belongs to the gluconokinase GntK/GntV family.
     
 0.569
MA16_Dca006922
Malate synthase, glyoxysomal.
   
  
 0.526
ALDH7B4
Aldehyde dehydrogenase family 7 member B4; Belongs to the aldehyde dehydrogenase family.
  
 
 0.519
ALDH12A1
Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial.
  
 
 0.518
ALDH5F1
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.518
ALDH3F1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.514
ALDH3F1-2
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.514
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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