STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca024316Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family. (280 aa)    
Predicted Functional Partners:
HPA
Histidinol-phosphate aminotransferase, chloroplastic.
 
 0.999
MA16_Dca010627
Imidazole glycerol phosphate synthase hisHF, chloroplastic; Belongs to the HisA/HisF family.
 
 
 0.998
HIS6
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
  
 
 0.998
HDH
Histidinol dehydrogenase, chloroplastic; Belongs to the histidinol dehydrogenase family.
 
 0.996
MA16_Dca006717
GDSL esterase/lipase.
  
 
 0.975
MA16_Dca005948
Imidazole glycerol phosphate synthase hisHF, chloroplastic.
  
 
 0.975
PSP
Phosphoserine phosphatase, chloroplastic.
  
  
 0.893
IMPL2
Bifunctional phosphatase IMPL2, chloroplastic.
  
 
 0.853
IMP3
Inositol-1-monophosphatase.
  
 
 0.815
IMPL1
Inositol-1-monophosphatase.
  
 
 0.815
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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