STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVRDivinyl chlorophyllide a 8-vinyl-reductase, chloroplastic. (406 aa)    
Predicted Functional Partners:
CHLG
Chlorophyll synthase, chloroplastic.
  
 
 0.987
CRD1
Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic.
   
 
 0.981
CAO
Chlorophyllide a oxygenase, chloroplastic.
    
 0.978
PORA
NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.
   
 
 0.956
MA16_Dca005104
Staygreen domain-containing protein.
     
  0.900
CLH2
Chlorophyllase-2, chloroplastic.
     
  0.900
CLH2-2
Chlorophyllase-2, chloroplastic.
     
  0.900
MA16_Dca019756
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
   
 0.885
NAD7
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2.
   
 0.883
MA16_Dca001667
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A.
   
 0.879
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.