STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLGG1Plastidal glycolate/glycerate translocator 1, chloroplastic. (544 aa)    
Predicted Functional Partners:
DIT1
Dicarboxylate transporter 1, chloroplastic.
  
  
 0.693
MKK6
Mitogen-activated protein kinase kinase 6.
      
 0.632
MKK6-2
Mitogen-activated protein kinase kinase 6; Belongs to the protein kinase superfamily.
      
 0.632
MKK6-3
Mitogen-activated protein kinase kinase 6; Belongs to the protein kinase superfamily.
      
 0.632
PI4KBETA1
Phosphatidylinositol 4-kinase beta 1; Belongs to the PI3/PI4-kinase family.
      
 0.631
PI4KBETA1-2
Phosphatidylinositol 4-kinase beta 1.
      
 0.631
PCMP-E95
Pentatricopeptide repeat-containing protein.
      
 0.623
RPL11
50S ribosomal protein L11, chloroplastic; Belongs to the universal ribosomal protein uL11 family.
   
  
 0.598
rpl11
50S ribosomal protein L11, chloroplastic; Belongs to the universal ribosomal protein uL11 family.
   
  
 0.583
RPL28
50S ribosomal protein L28, chloroplastic.
     
 0.573
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.